Computational Biology Trainings

by András Aszódi

Regular expressions

This course introduces regular expressions that can be used to find patterns in textual data, including nucleic acid and protein sequences. It is aimed at colleagues who wish to write their own data analysis scripts and are familiar with Python and/or R and/or the UNIX command line.

Topics

Out of scope

This course focuses on regular expressions as a general computational tool. We will not address concrete bioinformatics applications.

Prerequisites

Familiarity with Python, R and the UNIX command line is required to profit most from the practical examples.

Practical information

Number of participants: minimum 5, maximum 10.

Length: The course takes a half day, usually from 09:00 to 13:00.