Computational Biology Trainings

by András Aszódi

Bash scripting

This course teaches you how to write Bash shell scripts. It is aimed at colleagues who plan to work with UNIX-like operating systems including (but not limited to) HPC clusters.


Out of scope

We will not learn about how to run programs on the HPC cluster! That knowledge is offered in the CBE HPC cluster introduction course.

Also note that this course addresses only the basics of Bash scripting. Consider attending the Regular expressions course to learn about how to find (and modify) string patterns in text files.